NRPS toolbox for the discovery of new ...
Document type :
Communication dans un congrès avec actes
Title :
NRPS toolbox for the discovery of new nonribosomal peptides and synthetases
Author(s) :
Pupin, Maude [Auteur]
Bioinformatics and Sequence Analysis [BONSAI]
Laboratoire d'Informatique Fondamentale de Lille [LIFL]
Smaïl-Tabbone, Malika [Auteur]
Knowledge representation, reasonning [ORPAILLEUR]
Jacques, Philippe [Auteur]
Laboratoire des Procédés Biologiques Génie Enzymatique et Microbien [PROBIOGEM]
Devignes, Marie-Dominique [Auteur correspondant]
Knowledge representation, reasonning [ORPAILLEUR]
Leclere, Valerie [Auteur]
Laboratoire des Procédés Biologiques Génie Enzymatique et Microbien [PROBIOGEM]

Bioinformatics and Sequence Analysis [BONSAI]
Laboratoire d'Informatique Fondamentale de Lille [LIFL]
Smaïl-Tabbone, Malika [Auteur]
Knowledge representation, reasonning [ORPAILLEUR]
Jacques, Philippe [Auteur]
Laboratoire des Procédés Biologiques Génie Enzymatique et Microbien [PROBIOGEM]
Devignes, Marie-Dominique [Auteur correspondant]
Knowledge representation, reasonning [ORPAILLEUR]
Leclere, Valerie [Auteur]

Laboratoire des Procédés Biologiques Génie Enzymatique et Microbien [PROBIOGEM]
Scientific editor(s) :
François Coste et Denis Tagu
Conference title :
Journées Ouvertes en Biologie, l'Informatique et les Mathématiques - JOBIM 2012
City :
Rennes
Country :
France
Start date of the conference :
2012-07-03
Publication date :
2012
English keyword(s) :
database
protein annotation
nonribosomal peptides
nonribosomal synthetase
protein annotation
nonribosomal peptides
nonribosomal synthetase
HAL domain(s) :
Informatique [cs]/Bio-informatique [q-bio.QM]
Sciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
Informatique [cs]/Base de données [cs.DB]
Sciences du Vivant [q-bio]/Bio-Informatique, Biologie Systémique [q-bio.QM]
Informatique [cs]/Base de données [cs.DB]
English abstract : [en]
Nonribosomal peptide synthetases are huge multi-enzymatic complexes synthesizing peptides, but not through the classical process of transcription and then translation. The synthetases are organised in modules, each one ...
Show more >Nonribosomal peptide synthetases are huge multi-enzymatic complexes synthesizing peptides, but not through the classical process of transcription and then translation. The synthetases are organised in modules, each one integrating an amino acid in the final peptide. The modules are divided in domains providing specialized activities. So, those enzymes are as diverse as their products. We present our toolbox designed to annotate them accurately and promising results obtained on some Burkholderia, Bacillus and Pseudomonas genomes.Show less >
Show more >Nonribosomal peptide synthetases are huge multi-enzymatic complexes synthesizing peptides, but not through the classical process of transcription and then translation. The synthetases are organised in modules, each one integrating an amino acid in the final peptide. The modules are divided in domains providing specialized activities. So, those enzymes are as diverse as their products. We present our toolbox designed to annotate them accurately and promising results obtained on some Burkholderia, Bacillus and Pseudomonas genomes.Show less >
Language :
Anglais
Peer reviewed article :
Oui
Audience :
Nationale
Popular science :
Non
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