International electronic health record-derived ...
Document type :
Compte-rendu et recension critique d'ouvrage
PMID :
Title :
International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium
Author(s) :
Brat, Gabriel [Auteur]
Harvard Medical School [Boston] [HMS]
Weber, Griffin [Auteur]
Harvard Medical School [Boston] [HMS]
Gehlenborg, Nils [Auteur]
Harvard Medical School [Boston] [HMS]
Avillach, Paul [Auteur]
Harvard Medical School [Boston] [HMS]
Palmer, Nathan [Auteur]
Harvard Medical School [Boston] [HMS]
Chiovato, Luca [Auteur]
Università degli Studi di Pavia = University of Pavia [UNIPV]
Cimino, James [Auteur]
University of Alabama at Birmingham [ Birmingham] [UAB]
Beaulieu-Jones, Brett [Auteur]
Harvard Medical School [Boston] [HMS]
L'Yi, Sehi [Auteur]
Harvard Medical School [Boston] [HMS]
Keller, Mark [Auteur]
Harvard Medical School [Boston] [HMS]
Bell, Douglas [Auteur]
David Geffen School of Medicine [Los Angeles]
Follett, Robert [Auteur]
David Geffen School of Medicine [Los Angeles]
Patel, Lav [Auteur]
University of Kansas [Kansas City]
Jannot, Anne [Auteur]
Hôpital Européen Georges Pompidou [APHP] [HEGP]
Waitman, Lemuel [Auteur]
University of Kansas [Kansas City]
Omenn, Gilbert [Auteur]
University of Michigan [Ann Arbor]
Malovini, Alberto [Auteur]
Istituti Clinici Scientifici Maugeri [Pavia] [IRCCS Pavia - ICS Maugeri]
Moore, Jason [Auteur]
Perelman School of Medicine
Tibollo, Valentina [Auteur]
Istituti Clinici Scientifici Maugeri [Pavia] [IRCCS Pavia - ICS Maugeri]
Murphy, Shawn [Auteur]
Massachusetts General Hospital [Boston]
Bellazzi, Riccardo [Auteur]
Laboratory for BioMedical Informatics [BMI]
Hanauer, David [Auteur]
University of Michigan Medical School [Ann Arbor]
Serret-Larmande, Arnaud [Auteur]
AP-HP - Hôpital Bichat - Claude Bernard [Paris]
Gutierrez-Sacristan, Alba [Auteur]
Harvard Medical School [Boston] [HMS]
Holmes, John [Auteur]
Perelman School of Medicine
Mandl, Kenneth [Auteur]
Boston Children's Hospital
Klann, Jeffrey [Auteur]
Massachusetts General Hospital [Boston]
Murad, Douglas [Auteur]
David Geffen School of Medicine [Los Angeles]
Scudeller, Luigia [Auteur]
IRCCS Ospedale San Raffaele [Milan, Italy]
Bucalo, Mauro [Auteur]
BIOMERIS [Pavia]
Kirchoff, Katie [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Craig, Jean [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Obeid, Jihad [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Jouhet, Vianney [Auteur]
Bordeaux population health [BPH]
Unité d'épidémiologie, biostatistique et registre des cancers [Poitou-Charentes]
Griffier, Romain [Auteur]
CHU Bordeaux
Cossin, Sébastien [Auteur]
Bordeaux population health [BPH]
Université de Bordeaux [UB]
Moal, Bertrand [Auteur]
Laboratoire de biomécanique [LBM]
Bellasi, Antonio [Auteur]
Azienda Ospedaliera Ospedale Papa Giovanni XXIII [Bergamo, Italy]
Prokosch, Hans [Auteur]
Friedrich-Alexander Universität Erlangen-Nürnberg = University of Erlangen-Nuremberg [FAU]
Kraska, Detlef [Auteur]
Universitätsklinikum Erlangen [Erlangen]
Sliz, Piotr [Auteur]
Boston Children's Hospital
Tan, Amelia [Auteur]
Harvard Medical School [Boston] [HMS]
Ngiam, Kee Yuan [Auteur]
National University Health System [Singapore] [NUHS]
Zambelli, Alberto [Auteur]
Azienda Ospedaliera Ospedale Papa Giovanni XXIII [Bergamo, Italy]
Mowery, Danielle [Auteur]
Perelman School of Medicine
Schiver, Emily [Auteur]
Perelman School of Medicine
Devkota, Batsal [Auteur]
Children’s Hospital of Philadelphia [CHOP ]
Bradford, Robert [Auteur]
North Carolina Translational and Clinical Sciences [Chapel Hill] [NC TraCS]
Daniar, Mohamad [Auteur]
Boston Children's Hospital
Daniel, Christel [Auteur]
Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé [LIMICS]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Benoit, Vincent [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Bey, Romain [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Paris, Nicolas [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Serre, Patricia [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Orlova, Nina [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Dubiel, Julien [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Hilka, Martin [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Breant, Stephane [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Leblanc, Judith [Auteur]
Infection et inflammation [2I]
Griffon, Nicolas [Auteur]
Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé [LIMICS]
Laboratoire d'Informatique, de Traitement de l'Information et des Systèmes [LITIS]
Burgun, Anita [Auteur]
Centre de Recherche des Cordeliers [CRC (UMR_S_1138 / U1138)]
Service d'informatique médicale
Service d'informatique médicale et biostatistiques [CHU Necker]
Bernaux, Melodie [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Sandrin, Arnaud [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Salamanca, Elisa [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Cormont, Sylvie [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Ganslandt, Thomas [Auteur]
Universität Heidelberg [Heidelberg] = Heidelberg University
Gradinger, Tobias [Auteur]
Universität Heidelberg [Heidelberg] = Heidelberg University
Champ, Julien [Auteur]
Scientific Data Management [ZENITH]
Boeker, Martin [Auteur]
University of Freiburg [Freiburg]
Martel, Patricia [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Estève, Loïc [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Gramfort, Alexandre [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Grisel, Olivier [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Leprovost, Damien [Auteur]
Clevy.io - Agents conversationnels à destination des grandes entreprises et du secteur public [Paris] [clevy.io]
Moreau, Thomas [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Varoquaux, Gael [Auteur]
McConnell Brain Imaging Centre [MNI]
Montreal Institute for Learning Algorithms [Montréal] [MILA]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Vie, Jill-JÊnn [Auteur]
Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 [CRIStAL]
Scool [Scool]
Wassermann, Demian [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Mensch, Arthur [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Caucheteux, Charlotte [Auteur]
École polytechnique [X]
Haverkamp, Christian [Auteur]
University of Freiburg [Freiburg]
Lemaître, Guillaume [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Bosari, Silvano [Auteur]
Università degli Studi di Milano = University of Milan [UNIMI]
South, Andrew [Auteur]
Jefferson (Philadelphia University + Thomas Jefferson University)
Cai, Tianxi [Auteur]
Harvard T.H. Chan School of Public Health
Kohane, Isaac [Auteur]
Harvard Medical School [Boston] [HMS]
Harvard Medical School [Boston] [HMS]
Weber, Griffin [Auteur]
Harvard Medical School [Boston] [HMS]
Gehlenborg, Nils [Auteur]
Harvard Medical School [Boston] [HMS]
Avillach, Paul [Auteur]
Harvard Medical School [Boston] [HMS]
Palmer, Nathan [Auteur]
Harvard Medical School [Boston] [HMS]
Chiovato, Luca [Auteur]
Università degli Studi di Pavia = University of Pavia [UNIPV]
Cimino, James [Auteur]
University of Alabama at Birmingham [ Birmingham] [UAB]
Beaulieu-Jones, Brett [Auteur]
Harvard Medical School [Boston] [HMS]
L'Yi, Sehi [Auteur]
Harvard Medical School [Boston] [HMS]
Keller, Mark [Auteur]
Harvard Medical School [Boston] [HMS]
Bell, Douglas [Auteur]
David Geffen School of Medicine [Los Angeles]
Follett, Robert [Auteur]
David Geffen School of Medicine [Los Angeles]
Patel, Lav [Auteur]
University of Kansas [Kansas City]
Jannot, Anne [Auteur]
Hôpital Européen Georges Pompidou [APHP] [HEGP]
Waitman, Lemuel [Auteur]
University of Kansas [Kansas City]
Omenn, Gilbert [Auteur]
University of Michigan [Ann Arbor]
Malovini, Alberto [Auteur]
Istituti Clinici Scientifici Maugeri [Pavia] [IRCCS Pavia - ICS Maugeri]
Moore, Jason [Auteur]
Perelman School of Medicine
Tibollo, Valentina [Auteur]
Istituti Clinici Scientifici Maugeri [Pavia] [IRCCS Pavia - ICS Maugeri]
Murphy, Shawn [Auteur]
Massachusetts General Hospital [Boston]
Bellazzi, Riccardo [Auteur]
Laboratory for BioMedical Informatics [BMI]
Hanauer, David [Auteur]
University of Michigan Medical School [Ann Arbor]
Serret-Larmande, Arnaud [Auteur]
AP-HP - Hôpital Bichat - Claude Bernard [Paris]
Gutierrez-Sacristan, Alba [Auteur]
Harvard Medical School [Boston] [HMS]
Holmes, John [Auteur]
Perelman School of Medicine
Mandl, Kenneth [Auteur]
Boston Children's Hospital
Klann, Jeffrey [Auteur]
Massachusetts General Hospital [Boston]
Murad, Douglas [Auteur]
David Geffen School of Medicine [Los Angeles]
Scudeller, Luigia [Auteur]
IRCCS Ospedale San Raffaele [Milan, Italy]
Bucalo, Mauro [Auteur]
BIOMERIS [Pavia]
Kirchoff, Katie [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Craig, Jean [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Obeid, Jihad [Auteur]
Medical University of South Carolina [Charleston] [MUSC]
Jouhet, Vianney [Auteur]
Bordeaux population health [BPH]
Unité d'épidémiologie, biostatistique et registre des cancers [Poitou-Charentes]
Griffier, Romain [Auteur]
CHU Bordeaux
Cossin, Sébastien [Auteur]
Bordeaux population health [BPH]
Université de Bordeaux [UB]
Moal, Bertrand [Auteur]
Laboratoire de biomécanique [LBM]
Bellasi, Antonio [Auteur]
Azienda Ospedaliera Ospedale Papa Giovanni XXIII [Bergamo, Italy]
Prokosch, Hans [Auteur]
Friedrich-Alexander Universität Erlangen-Nürnberg = University of Erlangen-Nuremberg [FAU]
Kraska, Detlef [Auteur]
Universitätsklinikum Erlangen [Erlangen]
Sliz, Piotr [Auteur]
Boston Children's Hospital
Tan, Amelia [Auteur]
Harvard Medical School [Boston] [HMS]
Ngiam, Kee Yuan [Auteur]
National University Health System [Singapore] [NUHS]
Zambelli, Alberto [Auteur]
Azienda Ospedaliera Ospedale Papa Giovanni XXIII [Bergamo, Italy]
Mowery, Danielle [Auteur]
Perelman School of Medicine
Schiver, Emily [Auteur]
Perelman School of Medicine
Devkota, Batsal [Auteur]
Children’s Hospital of Philadelphia [CHOP ]
Bradford, Robert [Auteur]
North Carolina Translational and Clinical Sciences [Chapel Hill] [NC TraCS]
Daniar, Mohamad [Auteur]
Boston Children's Hospital
Daniel, Christel [Auteur]
Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé [LIMICS]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Benoit, Vincent [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Bey, Romain [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Paris, Nicolas [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Serre, Patricia [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Orlova, Nina [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Dubiel, Julien [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Hilka, Martin [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Breant, Stephane [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Leblanc, Judith [Auteur]
Infection et inflammation [2I]
Griffon, Nicolas [Auteur]
Laboratoire d'Informatique Médicale et Ingénierie des Connaissances en e-Santé [LIMICS]
Laboratoire d'Informatique, de Traitement de l'Information et des Systèmes [LITIS]
Burgun, Anita [Auteur]
Centre de Recherche des Cordeliers [CRC (UMR_S_1138 / U1138)]
Service d'informatique médicale
Service d'informatique médicale et biostatistiques [CHU Necker]
Bernaux, Melodie [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Sandrin, Arnaud [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Salamanca, Elisa [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Cormont, Sylvie [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Ganslandt, Thomas [Auteur]
Universität Heidelberg [Heidelberg] = Heidelberg University
Gradinger, Tobias [Auteur]
Universität Heidelberg [Heidelberg] = Heidelberg University
Champ, Julien [Auteur]
Scientific Data Management [ZENITH]
Boeker, Martin [Auteur]
University of Freiburg [Freiburg]
Martel, Patricia [Auteur]
Assistance publique - Hôpitaux de Paris (AP-HP) [AP-HP]
Estève, Loïc [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Gramfort, Alexandre [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Grisel, Olivier [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Leprovost, Damien [Auteur]
Clevy.io - Agents conversationnels à destination des grandes entreprises et du secteur public [Paris] [clevy.io]
Moreau, Thomas [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Varoquaux, Gael [Auteur]
McConnell Brain Imaging Centre [MNI]
Montreal Institute for Learning Algorithms [Montréal] [MILA]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Vie, Jill-JÊnn [Auteur]
Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189 [CRIStAL]
Scool [Scool]
Wassermann, Demian [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Mensch, Arthur [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Caucheteux, Charlotte [Auteur]
École polytechnique [X]
Haverkamp, Christian [Auteur]
University of Freiburg [Freiburg]
Lemaître, Guillaume [Auteur]
Modelling brain structure, function and variability based on high-field MRI data [PARIETAL]
Bosari, Silvano [Auteur]
Università degli Studi di Milano = University of Milan [UNIMI]
South, Andrew [Auteur]
Jefferson (Philadelphia University + Thomas Jefferson University)
Cai, Tianxi [Auteur]
Harvard T.H. Chan School of Public Health
Kohane, Isaac [Auteur]
Harvard Medical School [Boston] [HMS]
Journal title :
npj Digital Medicine
Pages :
#109
Publisher :
Nature Research
Publication date :
2020-12
English keyword(s) :
Databases
Outcomes research
Viral infection
Outcomes research
Viral infection
HAL domain(s) :
Physique [physics]/Physique [physics]/Physique Atomique [physics.atom-ph]
English abstract : [en]
We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international ...
Show more >We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) of 96 hospitals across 5 countries (www.covidclinical.net). Contributors utilized the Informatics for Integrating Biology and the Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms to map to a common data model. The group focused on comorbidities and temporal changes in key laboratory test values. Harmonized data were analyzed locally and converted to a shared aggregate form for rapid analysis and visualization of regional differences and global commonalities. Data covered 27,584 COVID-19 cases with 187,802 laboratory tests. Case counts and laboratory trajectories were concordant with existing literature. Laboratory tests at the time of diagnosis showed hospital-level differences equivalent to country-level variation across the consortium partners. Despite the limitations of decentralized data generation, we established a framework to capture the trajectory of COVID-19 disease in patients and their response to interventions.Show less >
Show more >We leveraged the largely untapped resource of electronic health record data to address critical clinical and epidemiological questions about Coronavirus Disease 2019 (COVID-19). To do this, we formed an international consortium (4CE) of 96 hospitals across 5 countries (www.covidclinical.net). Contributors utilized the Informatics for Integrating Biology and the Bedside (i2b2) or Observational Medical Outcomes Partnership (OMOP) platforms to map to a common data model. The group focused on comorbidities and temporal changes in key laboratory test values. Harmonized data were analyzed locally and converted to a shared aggregate form for rapid analysis and visualization of regional differences and global commonalities. Data covered 27,584 COVID-19 cases with 187,802 laboratory tests. Case counts and laboratory trajectories were concordant with existing literature. Laboratory tests at the time of diagnosis showed hospital-level differences equivalent to country-level variation across the consortium partners. Despite the limitations of decentralized data generation, we established a framework to capture the trajectory of COVID-19 disease in patients and their response to interventions.Show less >
Language :
Anglais
Popular science :
Non
Collections :
Source :
Files
- https://hal.archives-ouvertes.fr/hal-02918344/document
- Open access
- Access the document
- https://www.nature.com/articles/s41746-020-00308-0.pdf
- Open access
- Access the document
- https://hal.archives-ouvertes.fr/hal-02918344/document
- Open access
- Access the document
- https://hal.archives-ouvertes.fr/hal-02918344/document
- Open access
- Access the document
- https://hal.archives-ouvertes.fr/hal-02918344/document
- Open access
- Access the document
- document
- Open access
- Access the document
- covid_ehr.pdf
- Open access
- Access the document
- s41746-020-00308-0.pdf
- Open access
- Access the document