Genome of the red alga Porphyridium purpureum
Document type :
Article dans une revue scientifique
DOI :
Permalink :
Title :
Genome of the red alga Porphyridium purpureum
Author(s) :
Bhattacharya, Debashish [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Price, Dana C. [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Chan, Cheong Xin [Auteur]
The University of Queensland [UQ [All campuses : Brisbane, Dutton Park Gatton, Herston, St Lucia and other locations]]
Qiu, Huan [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Rose, Nicholas [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Ball, Steven [Auteur]
Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 [UGSF]
Weber, Andreas P.M. [Auteur]
Cluster of Excellence on Plant Sciences [CEPLAS]
Arias, Maria-CÉcilia [Auteur]
Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 [UGSF]
Henrissat, Bernard [Auteur]
Architecture et fonction des macromolécules biologiques [AFMB]
Coutinho, Pedro M. [Auteur]
Architecture et fonction des macromolécules biologiques [AFMB]
Krishnan, Anagha [Auteur]
WINLAB Rutgers University
Zäuner, Simone [Auteur]
Rheinische Friedrich-Wilhelms-Universität Bonn
Morath, Shannon [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Hilliou, Frédérique [Auteur]
Institut Sophia Agrobiotech [ISA]
Egizi, Andrea [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Perrineau, Marie-Mathilde [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Yoon, Hwan Su [Auteur]
Sungkyunkwan University [Suwon] [SKKU]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Price, Dana C. [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Chan, Cheong Xin [Auteur]
The University of Queensland [UQ [All campuses : Brisbane, Dutton Park Gatton, Herston, St Lucia and other locations]]
Qiu, Huan [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Rose, Nicholas [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Ball, Steven [Auteur]

Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 [UGSF]
Weber, Andreas P.M. [Auteur]
Cluster of Excellence on Plant Sciences [CEPLAS]
Arias, Maria-CÉcilia [Auteur]

Unité de Glycobiologie Structurale et Fonctionnelle - UMR 8576 [UGSF]
Henrissat, Bernard [Auteur]
Architecture et fonction des macromolécules biologiques [AFMB]
Coutinho, Pedro M. [Auteur]
Architecture et fonction des macromolécules biologiques [AFMB]
Krishnan, Anagha [Auteur]
WINLAB Rutgers University
Zäuner, Simone [Auteur]
Rheinische Friedrich-Wilhelms-Universität Bonn
Morath, Shannon [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Hilliou, Frédérique [Auteur]
Institut Sophia Agrobiotech [ISA]
Egizi, Andrea [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Perrineau, Marie-Mathilde [Auteur]
Rutgers, The State University of New Jersey [New Brunswick] [RU]
Yoon, Hwan Su [Auteur]
Sungkyunkwan University [Suwon] [SKKU]
Journal title :
Nature communications
Volume number :
4
Publication date :
2013-12
ISSN :
2041-1723
HAL domain(s) :
Chimie/Chimie théorique et/ou physique
English abstract : [en]
The limited knowledge we have about red algal genomes comes from the highly specializedextremophiles, Cyanidiophyceae. Here, we describe the first genome sequence from amesophilic, unicellular red alga,Porphyridium ...
Show more >The limited knowledge we have about red algal genomes comes from the highly specializedextremophiles, Cyanidiophyceae. Here, we describe the first genome sequence from amesophilic, unicellular red alga,Porphyridium purpureum. The 8,355 predicted genes inP. purpureum, hundreds of which are likely to be implicated in a history of horizontal genetransfer, reside in a genome of 19.7 Mbp with 235 spliceosomal introns. Analysis oflight-harvesting complex proteins reveals a nuclear-encoded phycobiliprotein in the alga.We uncover a complex set of carbohydrate-active enzymes, identify the genes required forthe methylerythritol phosphate pathway of isoprenoid biosynthesis, and find evidence ofsexual reproduction. Analysis of the compact, function-rich genome ofP. purpureumsuggeststhat ancestral lineages of red algae acted as mediators of horizontal gene transfer betweenprokaryotes and photosynthetic eukaryotes, thereby significantly enriching genomes acrossthe tree of photosynthetic life.Show less >
Show more >The limited knowledge we have about red algal genomes comes from the highly specializedextremophiles, Cyanidiophyceae. Here, we describe the first genome sequence from amesophilic, unicellular red alga,Porphyridium purpureum. The 8,355 predicted genes inP. purpureum, hundreds of which are likely to be implicated in a history of horizontal genetransfer, reside in a genome of 19.7 Mbp with 235 spliceosomal introns. Analysis oflight-harvesting complex proteins reveals a nuclear-encoded phycobiliprotein in the alga.We uncover a complex set of carbohydrate-active enzymes, identify the genes required forthe methylerythritol phosphate pathway of isoprenoid biosynthesis, and find evidence ofsexual reproduction. Analysis of the compact, function-rich genome ofP. purpureumsuggeststhat ancestral lineages of red algae acted as mediators of horizontal gene transfer betweenprokaryotes and photosynthetic eukaryotes, thereby significantly enriching genomes acrossthe tree of photosynthetic life.Show less >
Language :
Anglais
Audience :
Non spécifiée
Administrative institution(s) :
CNRS
Université de Lille
Université de Lille
Research team(s) :
Génétique microbienne
Submission date :
2020-02-12T15:45:06Z
2021-04-29T10:13:02Z
2021-04-29T10:13:02Z