Data on the identification of microsatellite markers in Eisenia fetida and Eisenia andrei.

Jaskulak, Marta; Vandenbulcke, Franck; Rorat, Agnieszka; Pauwels, Maxime; Zorena, K.; Grzmil, P.; Płytycz, B.

Document type :

Compte-rendu et recension critique d'ouvrage: Autre communication scientifique (congrès sans actes - poster - séminaire...)

DOI :

10.1016/j.dib.2022.108612

PMID :

36425961

Title :

Data on the identification of microsatellite markers in Eisenia fetida and Eisenia andrei.

Author(s) :

Jaskulak, Marta [Auteur]
Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 [LGCgE]
Vandenbulcke, Franck [Auteur]

Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 [LGCgE]
Rorat, Agnieszka [Auteur]
Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 [LGCgE]
Pauwels, Maxime [Auteur]

Laboratoire de Génie Civil et Géo-Environnement (LGCgE) - ULR 4515 [LGCgE]
Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 [Evo-Eco-Paléo (EEP)]
Zorena, K. [Auteur]
Grzmil, P. [Auteur]
Płytycz, B. [Auteur]

Journal title :

Data in Brief

Pages :

108612

Publisher :

Elsevier

Publication date :

2022-12-01

ISSN :

2352-3409

English keyword(s) :

SSR markers
Microsatellites
Molecular markers
Simple sequence repeats
Earthworms

HAL domain(s) :

Sciences de l'environnement/Ingénierie de l'environnement

English abstract : [en]

Eisenia fetida and Eisenia andrei are closely related earthworm species that play a crucial part in soil and influence its structure and organic matter cycling. Due to their essential environmental role, they are widely ...
Show more >Eisenia fetida and Eisenia andrei are closely related earthworm species that play a crucial part in soil and influence its structure and organic matter cycling. Due to their essential environmental role, they are widely used as model organisms in a vast spectrum of research areas. In this work, we partially sequenced genomes of E. fetida and E. andrei, using Illumina technology (Nano 2 × 250 v2 - MiSeq) and de novo assembly strategy. A total of 3785 and 4258 microsatellite or Simple Sequence Repeat (SSR) markers were identified within E. fetida and E. andrei genomic DNA, respectively. The microsatellite markers will facilitate the analyses of genetic diversity and population genetics studies for the two selected earthworm species and their interspecific hybrids.Show less >

Language :

Anglais

Popular science :

Non

Collections :

Évolution, Écologie et Paléontologie (Evo Eco Paleo) - UMR 8198

Source :

Harvested from HAL

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